import os.path import math from PyQt4 import QtGui from PyQt4.QtCore import * from qgis.core import * from sextante.core.GeoAlgorithm import GeoAlgorithm from sextante.core.QGisLayers import QGisLayers from sextante.parameters.ParameterVector import ParameterVector from sextante.parameters.ParameterTableField import ParameterTableField from sextante.parameters.ParameterBoolean import ParameterBoolean from sextante.outputs.OutputHTML import OutputHTML from sextante.outputs.OutputNumber import OutputNumber from sextante.ftools import FToolsUtils as utils class BasicStatisticsNumbers(GeoAlgorithm): INPUT_LAYER = "INPUT_LAYER" FIELD_NAME = "FIELD_NAME" USE_SELECTION = "USE_SELECTION" OUTPUT_HTML_FILE = "OUTPUT_HTML_FILE" CV = "CV" MIN = "MIN" MAX = "MAX" SUM = "SUM" MEAN = "MEAN" COUNT = "COUNT" RANGE = "RANGE" MEDIAN = "MEDIAN" UNIQUE = "UNIQUE" STD_DEV = "STD_DEV" def getIcon(self): return QtGui.QIcon(os.path.dirname(__file__) + "/icons/basic_statistics.png") def defineCharacteristics(self): self.name = "Basic statistics for numeric fields" self.group = "Analysis tools" self.addParameter(ParameterVector(self.INPUT_LAYER, "Input vector layer", ParameterVector.VECTOR_TYPE_ANY, False)) self.addParameter(ParameterTableField(self.FIELD_NAME, "Field to calculate statistics on", self.INPUT_LAYER, ParameterTableField.DATA_TYPE_NUMBER)) self.addParameter(ParameterBoolean(self.USE_SELECTION, "Use selection", False)) self.addOutput(OutputHTML(self.OUTPUT_HTML_FILE, "Statistics for numeric field")) self.addOutput(OutputNumber(self.CV, "Coefficient of Variation")) self.addOutput(OutputNumber(self.MIN, "Minimum value")) self.addOutput(OutputNumber(self.MAX, "Maximum value")) self.addOutput(OutputNumber(self.SUM, "Sum")) self.addOutput(OutputNumber(self.MEAN, "Mean value")) self.addOutput(OutputNumber(self.COUNT, "Count")) self.addOutput(OutputNumber(self.RANGE, "Range")) self.addOutput(OutputNumber(self.MEDIAN, "Median")) self.addOutput(OutputNumber(self.UNIQUE, "Number of unique values")) self.addOutput(OutputNumber(self.STD_DEV, "Standard deviation")) def processAlgorithm(self, progress): layer = QGisLayers.getObjectFromUri(self.getParameterValue(self.INPUT_LAYER)) fieldName = self.getParameterValue(self.FIELD_NAME) useSelection = self.getParameterValue(self.USE_SELECTION) outputFile = self.getOutputValue(self.OUTPUT_HTML_FILE) index = layer.fieldNameIndex(fieldName) layer.select([index], QgsRectangle(), False) count = 0 rValue = 0 cvValue = 0 minValue = 0 maxValue = 0 sumValue = 0 meanValue = 0 medianValue = 0 stdDevValue = 0 uniqueValue = 0 isFirst = True values = [] if useSelection: selection = layer.selectedFeatures() count = layer.selectedFeatureCount() total = 100.0 / float(count) current = 0 for f in selection: value = float(f.attributeMap()[index].toDouble()[0]) if isFirst: minValue = value maxValue = value isFirst = False else: if value < minValue: minValue = value if value > maxValue: maxValue = value values.append(value) sumValue += value current += 1 progress.setPercentage(int(current * total)) else: count = layer.featureCount() total = 100.0 / float(count) current = 0 ft = QgsFeature() while layer.nextFeature(ft): value = float(ft.attributeMap()[index].toDouble()[0]) if isFirst: minValue = value maxValue = value isFirst = False else: if value < minValue: minValue = value if value > maxValue: maxValue = value values.append( value ) sumValue += value current += 1 progress.setPercentage(int(current * total)) # calculate additional values rValue = maxValue - minValue uniqueValue = utils.getUniqueValuesCount(layer, index, useSelection) if count > 0: meanValue = sumValue / count if meanValue != 0.00: for v in values: stdDevValue += ((v - meanValue) * (v - meanValue)) stdDevValue = math.sqrt(stdDevValue / count) cvValue = stdDevValue / meanValue if count > 1: tmp = values tmp.sort() # calculate median if (count % 2) == 0: medianValue = 0.5 * (tmp[(count - 1) / 2] + tmp[count / 2]) else: medianValue = tmp[(count + 1) / 2 - 1] data = [] data.append("Count: " + unicode(count)) data.append("Unique values: " + unicode(uniqueValue)) data.append("Minimum value: " + unicode(minValue)) data.append("Maximum value: " + unicode(maxValue)) data.append("Range: " + unicode(rValue)) data.append("Sum: " + unicode(sumValue)) data.append("Mean value: " + unicode(meanValue)) data.append("Median value: " + unicode(medianValue)) data.append("Standard deviation: " + unicode(stdDevValue)) data.append("Coefficient of Variation: " + unicode(cvValue)) self.createHTML(outputFile, data) self.setOutputValue(self.COUNT, count) self.setOutputValue(self.UNIQUE, uniqueValue) self.setOutputValue(self.MIN, minValue) self.setOutputValue(self.MAX, maxValue) self.setOutputValue(self.RANGE, rValue) self.setOutputValue(self.SUM, sumValue) self.setOutputValue(self.MEAN, meanValue) self.setOutputValue(self.MEDIAN, medianValue) self.setOutputValue(self.STD_DEV, stdDevValue) self.setOutputValue(self.CV, cvValue) def createHTML(self, outputFile, algData): f = open(outputFile, "w") for s in algData: f.write("

" + str(s) + "

") f.close()